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Powdery mildew-infected Arabidopsis epidermal cell. (Serry Koh, Shauna Somerville lab.)
At 18 hours after infection by the fungal pathogen, powdery mildew (Erysiphe cichoracearum), a
leaf sample was stained with propidium iodide to highlight fungal structures. The plant plasma membrane is
visualized with a GFP-tagged marker (Q8, arrows). The image shown is a z-series projection.
The haustorium (H) is a fungal feeding structure
formed in the plant epidermal cell (Ep) about 20 hours after penetration by an
appressorium (A). The mature haustorium has expanded lobe structures
(arrowheads) and a nucleus (nc). A host-derived extrahaustorial membrane
(EHM) encases the haustorium separating it from
plant cytoplasm (dotted line). The characteristics of the EHM are largely unknown.
Biochemical evidence suggests that the EHM is a unique
membrane, different from the plant plasma membrane. The
discontinuity of the plasma membrane protein::GFP signal at the haustorial
neck (yellow arrow), where the EHM starts, provides the clear optical
evidence suporting the distinct nature of the EHM. A fungal conidium is also visible in this image.
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Nomarski/DIC image of an Arabidopsis epidermal peel
showing elongated pavement cells and kidney-shaped guard
cells (Wolfgang Lukowitz, Chris Somerville's lab,
Carnegie Institution, Dept. of Plant Biology).
The epidermis of Arabidopsis stems contains two cell
types, pavement cells and guard cells. The guard cells
are paired and flank a pore that can open and close to
allow the exchange of carbon dioxide and water vapor.
Normally, very few guard cells are present on the stem,
but in the yoda mutant shown here, extra guard cells
appear in contact with one another.
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Spot image (left) and clustering tree (right) of cDNA microarray.
A spot image generated from cDNA microarray (on the
left). Two samples, one labeled with
Cy3 and the other labeled with Cy5, hybridize on a microarray chip, a piece of
glass containing thousands of spots of cDNA each representing a known gene. Genes more expressed in the Cy5
labeled sample are shown in red, those more expressed in the Cy3 labeled sample
are in green, and genes similarly expressed in both samples are shown in
yellow. The five columns on the right represent gene expression pattern under
five experimental conditions. Genes having similar expression patterns are
organized as a clustering tree.
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Confocal image of propidium iodide stained Arabidopsis root treated with novel plant growth regulator. (Dominique Bergmann, Chris Somerville's Lab, Carnegie Institution)
Advances in synthetic chemistry have made it possible to create
numerous small molecules with potential biological activity. A library of 10,000 unique compounds was screened for effects on root growth.
This compound induced the formation of lateral roots at the root/hypocotyl junction of a 7-day old Arabidopsis seedling.
Two well-formed lateral roots are visible at the lower left immediately below a fused set of lateral roots.
The curled tube-like structures on the right are root hairs and root epidermal cells that have peeled away as the lateral roots emerged from the internal tissues.
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Confocal image of an Arabidopsis root tip expressing a GFP reporter in the endodermis (green) and
counterstained with propidium iodide to visualize cell outlines (red). (Dominique Bergmann, Chris Somerville's Lab, Carnigie Intstitution, Dept of Plant Biology)
The Arabidopsis root consists of radially arranged tissues that are generated by divisions of the root meristem at the tip.
Each layer has specialized functions, and many genes are expressed in a tissue-specific manner.
In this image, green fluorescent protein is expressed in the domain of the transcription factor SCARECROW. In a wild type root,
SCR::GFP expression is in the center of the meristem as well as in the cylinder of endodermal cells, however, in the lonesome highway
mutant shown here, expression is missing from the meristem.
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Nomarski/DIC image of 7-day old Arabidopsis
cotyledon expressing the VH1::GUS marker (blue) in
developing veins (Dominique Bergmann, Chris Somerville’s
lab, Carnegie Institution, Dept. of Plant Biology).
Veins in the cotyledons (embryonic leaves) of
Arabidopsis are arranged in a stereotyped pattern.
Within the mature vein are both phloem (to transport
nutrients) and xylem (to transport water). In this
image, the precursors to these tissue types, the
provascular cells, express the VASCULAR HIGHWAY::GUS reporter.
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Petunia half-flower
Anthocyanin pigments provide most of the red, purple, and blue colors of flowers, and this
pigmentation provides a natural "reporter gene" assay for the
activities of transposable elements in many plants. Here a transposon disrupts the an9
gene of Petunia; an9 encodes a glutathione S-transferase
that acts as a carrier protein for anthocyanins in the cytoplasm. The plant is an an9-mutable homozygote.
The allele with the transposon lacks the AN9 protein,
hence anthocyanin accumulates in the cytoplasm where it confers only a pale pink color. In some cells, the
transposon excises from the mutable an9 allele in a
manner that restores gene function. In cells with functional AN9 the pigment is transferred to the vacuole;
in this acidic cellular compartment the pigmentation
is much more intense and red. The timing of transposon excision can be assessed by the size of the sectors:
most excisions occur late in development and result
in small red sectors because there are only a few cell divisions of the revertant cell. In this particular flower,
however, an excision event occurred early in plant
life such that half of the floral meristem that produced this flower was revertant. As a consequence, some
progeny seed collected from this flower will be
true-breeding red. (Walbot Lab)
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Picture of kernels and leaf Mu, bz2
The BRONZE2 protein of maize encodes a glutathione S-transferase that performs the same carrier protein function as
AN9 in Petunia. BZ2 and AN9 are an interesting case of convergent evolution of function: the two proteins are only 11% similar
yet they can reciprocally complement. More closely related GST proteins of either Petunia or maize fail to complement in the original host plant
or in transient assays in the alternate host.
An interesting aspect of host control of Mu transposons is illustrated in this figure. Using a mutable bz2::Mu reporter allele only small
revertant sectors are observed. This is in contrast with the Petunia transposon behavior that can excise at any time during plant development.
Although the transcripts encoding transposase and the transposase protein are constitutively expressed, excision activity is restricted to the final few
cell divisions throughout the plant. Does the host confer developmental timing by altering the transposase protein, by expressing gene products
required for transposition only late in development, by changing chromatin configuration during cellular differentiation? These questions can be
generalized to all aspects of cellular differentiation -- in a field of cells progressing through a developmental program, how do the cells know that
only a few more cell divisions will occur? How do plant organs and tissues achieve a final cell number, despite the variation in the actual number of
cells within successive organs such as leaves? Another important aspect of somatic excision activity is that in most cases Mu elements excise
without reinserting. If this behavior occurred in reproductive cells all the Mu elements would be lost. Yet, Mu elements are very effective
mutagens and can increase their copy number in progeny of a Mutator plant. (Walbot Lab)
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Confocal image of a cluster of stomata. Stomata are pores in the epidermis of
leaves and other above-ground plant organs that regulate the entry of carbon
dioxide and exit of water vapor. In this image, a cluster of stomata in the bocca
a bocca mutant are visualized by a dye that stains cell walls (in red) and a
tubulin::green fluorescent protein fusion that marks the microtubule cytoskeleton.
Overlap in the microtubule and cell wall staining is seen at the yellow 'mouths'. (Image from Dominique Bergmann)
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Nomarksi image of cleared leaf in fama mutant. Normal stomata consist of two guard
cells and a pore. In the fama mutant, the behavior of the mother of the two guard
cells is changed such that this cell keeps dividing--producing more and more guard
cells that cannot properly mature to form pores. Plants with mutations in FAMA
cannot obtain enough carbon dioxide for growth and die as very small pale
seedlings. (Image from Dominique Bergmann)
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Confocal image of a cluster of stomata in the yoda mutant. Stomatal guard cells
are one of three major cell types in the epidermis. Plants must balance the number
of stomata they make relative to the other cells types to optimize photosynthetic
growth while preventing water loss. The YODA gene plays a key role in maintaining
this balance and encodes a MAPKK kinase—part of a cellular signaling pathway.
Without YODA (this image) nearly all of the cells are guard cells. With too much
YODA, none of the cells become guard cells. (Image from Dominique Bergmann)
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Maize anthers
The BRONZE2 protein of maize encodes a glutathione S-transferase that performs the same carrier protein function as AN9 in Petunia.
BZ2 and AN9 are an interesting case of convergent evolution of function: the two proteins are only 11% similar yet they can reciprocally complement.
More closely related GST proteins of either Petunia or maize fail to complement in the original host plant or in transient assays in the alternate host.
Observing maize anthers with the bz2::MuDR allele indicates that transposon excision in the outer layers of the anther occurs late in development.
This deduction is possible because the resulting purple sectors on a bronze background are uniformly small.
Mu elements exhibit high frequency, late excision throughout the plant. In the cell divisions before cells are specified to initiate meiosis,
Mutator activity is also occuring, but the biochemical outcome is different. Instead of excision, an alternative transposase protein
catalyzes a net replicative Mu element movement. This means that the original site (such as bz2::MuDR) retains it's transposon
while new copies of the transposon are inserted elsewhere; the genetic consequences are a high forward mutation frequency
without germinal (heritable) revertant alleles. The MuDR element actually encodes three distinct transposase proteins as a
result of alternative splicing events. The transposase responsble for insertion events utilizes a novel start site of transcription,
a different first intron, and frameshift translation for synthesis. (Walbot Lab)
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